Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2aQ9DB34 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2aQ9DB34 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2aQ9DB34 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2aQ9DB34 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.07■□□□□ 0.64
Chmp2aQ9DB34 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.07■□□□□ 0.64
Chmp2aQ9DB34 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2aQ9DB34 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.07■□□□□ 0.64
Chmp2aQ9DB34 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2aQ9DB34 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.05■□□□□ 0.64
Chmp2aQ9DB34 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2aQ9DB34 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2aQ9DB34 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.03■□□□□ 0.64
Chmp2aQ9DB34 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.03■□□□□ 0.64
Chmp2aQ9DB34 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.03■□□□□ 0.64
Chmp2aQ9DB34 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Chmp2aQ9DB34 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2aQ9DB34 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2aQ9DB34 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2aQ9DB34 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2aQ9DB34 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Chmp2aQ9DB34 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2aQ9DB34 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp2aQ9DB34 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp2aQ9DB34 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp2aQ9DB34 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp2aQ9DB34 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2aQ9DB34 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2aQ9DB34 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Chmp2aQ9DB34 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.01■□□□□ 0.63
Chmp2aQ9DB34 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2aQ9DB34 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.01■□□□□ 0.63
Chmp2aQ9DB34 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2aQ9DB34 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Chmp2aQ9DB34 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Chmp2aQ9DB34 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2aQ9DB34 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19■□□□□ 0.63
Chmp2aQ9DB34 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms