Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tube1Q9D6T1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tube1Q9D6T1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tube1Q9D6T1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tube1Q9D6T1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.32■□□□□ 0.84
Tube1Q9D6T1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Tube1Q9D6T1 Gm37856-201ENSMUST00000191634 999 ntBASIC20.32■□□□□ 0.84
Tube1Q9D6T1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.32■□□□□ 0.84
Tube1Q9D6T1 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.32■□□□□ 0.84
Tube1Q9D6T1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tube1Q9D6T1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tube1Q9D6T1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tube1Q9D6T1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tube1Q9D6T1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tube1Q9D6T1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tube1Q9D6T1 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.31■□□□□ 0.84
Tube1Q9D6T1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tube1Q9D6T1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tube1Q9D6T1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Tube1Q9D6T1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tube1Q9D6T1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Tube1Q9D6T1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tube1Q9D6T1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tube1Q9D6T1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tube1Q9D6T1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tube1Q9D6T1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tube1Q9D6T1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tube1Q9D6T1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tube1Q9D6T1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tube1Q9D6T1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tube1Q9D6T1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tube1Q9D6T1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tube1Q9D6T1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Gm13168-201ENSMUST00000121771 632 ntBASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Trmt13-210ENSMUST00000198454 880 ntBASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tube1Q9D6T1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.27■□□□□ 0.84
Tube1Q9D6T1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tube1Q9D6T1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.27■□□□□ 0.83
Tube1Q9D6T1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tube1Q9D6T1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tube1Q9D6T1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Tube1Q9D6T1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tube1Q9D6T1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tube1Q9D6T1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tube1Q9D6T1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tube1Q9D6T1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.25■□□□□ 0.83
Tube1Q9D6T1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms