Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.29■□□□□ 0.04
ShpkQ9D5J6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ShpkQ9D5J6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShpkQ9D5J6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShpkQ9D5J6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShpkQ9D5J6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ShpkQ9D5J6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.29■□□□□ 0.04
ShpkQ9D5J6 Gm9870-201ENSMUST00000063874 645 ntBASIC15.29■□□□□ 0.04
ShpkQ9D5J6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShpkQ9D5J6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShpkQ9D5J6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShpkQ9D5J6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ShpkQ9D5J6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Serp2-204ENSMUST00000228055 705 ntBASIC15.28■□□□□ 0.04
ShpkQ9D5J6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ShpkQ9D5J6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ShpkQ9D5J6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
ShpkQ9D5J6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ShpkQ9D5J6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ShpkQ9D5J6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.26■□□□□ 0.03
ShpkQ9D5J6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShpkQ9D5J6 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.24■□□□□ 0.03
ShpkQ9D5J6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ShpkQ9D5J6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms