Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chaf1bQ9D0N7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chaf1bQ9D0N7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1bQ9D0N7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Gm12251-201ENSMUST00000117893 792 ntBASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1bQ9D0N7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms