Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ndc80Q9D0F1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndc80Q9D0F1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ndc80Q9D0F1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndc80Q9D0F1 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.56■□□□□ 0.56
Ndc80Q9D0F1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ndc80Q9D0F1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.56■□□□□ 0.56
Ndc80Q9D0F1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ndc80Q9D0F1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndc80Q9D0F1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndc80Q9D0F1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndc80Q9D0F1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.56■□□□□ 0.56
Ndc80Q9D0F1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndc80Q9D0F1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndc80Q9D0F1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Gm6420-201ENSMUST00000193885 723 ntBASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc80Q9D0F1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Nespas-201ENSMUST00000143738 1083 ntBASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.54■□□□□ 0.56
Ndc80Q9D0F1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc80Q9D0F1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ndc80Q9D0F1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ndc80Q9D0F1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ndc80Q9D0F1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc80Q9D0F1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc80Q9D0F1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc80Q9D0F1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ndc80Q9D0F1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc80Q9D0F1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc80Q9D0F1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ndc80Q9D0F1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ndc80Q9D0F1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ndc80Q9D0F1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ndc80Q9D0F1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ndc80Q9D0F1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ndc80Q9D0F1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc80Q9D0F1 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.5■□□□□ 0.55
Ndc80Q9D0F1 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.5■□□□□ 0.55
Ndc80Q9D0F1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndc80Q9D0F1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndc80Q9D0F1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndc80Q9D0F1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms