Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snf8Q9CZ28 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snf8Q9CZ28 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.8■□□□□ 0.6
Snf8Q9CZ28 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.8■□□□□ 0.6
Snf8Q9CZ28 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Snf8Q9CZ28 Gm26833-201ENSMUST00000180899 440 ntBASIC18.8■□□□□ 0.6
Snf8Q9CZ28 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snf8Q9CZ28 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.8■□□□□ 0.6
Snf8Q9CZ28 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snf8Q9CZ28 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.8■□□□□ 0.6
Snf8Q9CZ28 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snf8Q9CZ28 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snf8Q9CZ28 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snf8Q9CZ28 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Snf8Q9CZ28 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Gm6139-201ENSMUST00000079261 882 ntBASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snf8Q9CZ28 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Snf8Q9CZ28 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Snf8Q9CZ28 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snf8Q9CZ28 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Snf8Q9CZ28 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.74■□□□□ 0.59
Snf8Q9CZ28 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Snf8Q9CZ28 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms