Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc3Q9CW03 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc3Q9CW03 Gm13146-201ENSMUST00000118508 780 ntBASIC21.49■■□□□ 1.03
Smc3Q9CW03 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smc3Q9CW03 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.49■■□□□ 1.03
Smc3Q9CW03 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc3Q9CW03 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc3Q9CW03 Fst-202ENSMUST00000223640 2612 ntBASIC21.49■■□□□ 1.03
Smc3Q9CW03 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc3Q9CW03 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smc3Q9CW03 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Smc3Q9CW03 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.48■■□□□ 1.03
Smc3Q9CW03 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.48■■□□□ 1.03
Smc3Q9CW03 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Smc3Q9CW03 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smc3Q9CW03 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Smc3Q9CW03 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smc3Q9CW03 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Smc3Q9CW03 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smc3Q9CW03 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Smc3Q9CW03 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Smc3Q9CW03 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smc3Q9CW03 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smc3Q9CW03 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smc3Q9CW03 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smc3Q9CW03 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smc3Q9CW03 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Smc3Q9CW03 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Smc3Q9CW03 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smc3Q9CW03 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smc3Q9CW03 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.46■■□□□ 1.03
Smc3Q9CW03 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smc3Q9CW03 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
Smc3Q9CW03 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.46■■□□□ 1.03
Smc3Q9CW03 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smc3Q9CW03 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc3Q9CW03 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc3Q9CW03 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc3Q9CW03 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc3Q9CW03 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Smc3Q9CW03 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smc3Q9CW03 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.45■■□□□ 1.02
Smc3Q9CW03 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.44■■□□□ 1.02
Smc3Q9CW03 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc3Q9CW03 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smc3Q9CW03 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.44■■□□□ 1.02
Smc3Q9CW03 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smc3Q9CW03 Gm13534-201ENSMUST00000121169 513 ntBASIC21.43■■□□□ 1.02
Smc3Q9CW03 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smc3Q9CW03 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smc3Q9CW03 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smc3Q9CW03 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Smc3Q9CW03 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Smc3Q9CW03 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Smc3Q9CW03 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc3Q9CW03 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Smc3Q9CW03 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc3Q9CW03 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.42■■□□□ 1.02
Smc3Q9CW03 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc3Q9CW03 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc3Q9CW03 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.42■■□□□ 1.02
Smc3Q9CW03 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smc3Q9CW03 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smc3Q9CW03 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smc3Q9CW03 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smc3Q9CW03 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.41■■□□□ 1.02
Smc3Q9CW03 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smc3Q9CW03 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.41■■□□□ 1.02
Smc3Q9CW03 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms