Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Gm42778-201ENSMUST00000199644 553 ntBASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf111Q99ML9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Gm13234-201ENSMUST00000120010 747 ntBASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Gm5874-201ENSMUST00000096101 508 ntBASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf111Q99ML9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf111Q99ML9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf111Q99ML9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf111Q99ML9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms