Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tlr3Q99MB1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tlr3Q99MB1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Tlr3Q99MB1 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.58■□□□□ 0.73
Tlr3Q99MB1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tlr3Q99MB1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Tlr3Q99MB1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tlr3Q99MB1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Tlr3Q99MB1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tlr3Q99MB1 Gm10653-202ENSMUST00000139570 835 ntBASIC19.58■□□□□ 0.72
Tlr3Q99MB1 Gm22325-201ENSMUST00000158904 308 ntBASIC19.58■□□□□ 0.72
Tlr3Q99MB1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tlr3Q99MB1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tlr3Q99MB1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tlr3Q99MB1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.58■□□□□ 0.72
Tlr3Q99MB1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tlr3Q99MB1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Gm6211-202ENSMUST00000167849 925 ntBASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Gm4968-201ENSMUST00000071458 858 ntBASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tlr3Q99MB1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tlr3Q99MB1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tlr3Q99MB1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Tlr3Q99MB1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.55■□□□□ 0.72
Tlr3Q99MB1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.55■□□□□ 0.72
Tlr3Q99MB1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tlr3Q99MB1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tlr3Q99MB1 Gm20760-201ENSMUST00000179197 648 ntBASIC19.55■□□□□ 0.72
Tlr3Q99MB1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tlr3Q99MB1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tlr3Q99MB1 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.55■□□□□ 0.72
Tlr3Q99MB1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tlr3Q99MB1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tlr3Q99MB1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tlr3Q99MB1 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.52■□□□□ 0.72
Tlr3Q99MB1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms