Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk9Q99J95 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Gm27454-201ENSMUST00000185090 204 ntBASIC18.36■□□□□ 0.53
Cdk9Q99J95 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk9Q99J95 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Cdk9Q99J95 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.35■□□□□ 0.53
Cdk9Q99J95 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.35■□□□□ 0.53
Cdk9Q99J95 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk9Q99J95 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk9Q99J95 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk9Q99J95 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk9Q99J95 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk9Q99J95 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk9Q99J95 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk9Q99J95 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.34■□□□□ 0.53
Cdk9Q99J95 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk9Q99J95 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk9Q99J95 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk9Q99J95 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.53
Cdk9Q99J95 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk9Q99J95 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk9Q99J95 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk9Q99J95 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk9Q99J95 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk9Q99J95 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk9Q99J95 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk9Q99J95 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk9Q99J95 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cdk9Q99J95 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Cdk9Q99J95 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk9Q99J95 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Cdk9Q99J95 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cdk9Q99J95 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk9Q99J95 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.32■□□□□ 0.52
Cdk9Q99J95 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.32■□□□□ 0.52
Cdk9Q99J95 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk9Q99J95 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk9Q99J95 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms