Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb22Q91XZ8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb22Q91XZ8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhb22Q91XZ8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb22Q91XZ8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb22Q91XZ8 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.33■■□□□ 1.01
Pcdhb22Q91XZ8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb22Q91XZ8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhb22Q91XZ8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhb22Q91XZ8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb22Q91XZ8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb22Q91XZ8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb22Q91XZ8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb22Q91XZ8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pcdhb22Q91XZ8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pcdhb22Q91XZ8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Tgds-204ENSMUST00000228543 1594 ntBASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb22Q91XZ8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb22Q91XZ8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb22Q91XZ8 Flg-201ENSMUST00000050758 1488 ntBASIC21.27■■□□□ 1
Pcdhb22Q91XZ8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.27■■□□□ 1
Pcdhb22Q91XZ8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb22Q91XZ8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pcdhb22Q91XZ8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdhb22Q91XZ8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhb22Q91XZ8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms