Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb3Q91XZ7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb3Q91XZ7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb3Q91XZ7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Gm26833-201ENSMUST00000180899 440 ntBASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb3Q91XZ7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb3Q91XZ7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb3Q91XZ7 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.14■□□□□ 0.5
Pcdhb3Q91XZ7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms