Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.01■□□□□ 0.95
Trex1Q91XB0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trex1Q91XB0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trex1Q91XB0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trex1Q91XB0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trex1Q91XB0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trex1Q91XB0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trex1Q91XB0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trex1Q91XB0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trex1Q91XB0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trex1Q91XB0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trex1Q91XB0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trex1Q91XB0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trex1Q91XB0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trex1Q91XB0 Rncr4-201ENSMUST00000194541 2234 ntBASIC21■□□□□ 0.95
Trex1Q91XB0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trex1Q91XB0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.99■□□□□ 0.95
Trex1Q91XB0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trex1Q91XB0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.99■□□□□ 0.95
Trex1Q91XB0 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.99■□□□□ 0.95
Trex1Q91XB0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.99■□□□□ 0.95
Trex1Q91XB0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.99■□□□□ 0.95
Trex1Q91XB0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trex1Q91XB0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trex1Q91XB0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trex1Q91XB0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trex1Q91XB0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trex1Q91XB0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trex1Q91XB0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trex1Q91XB0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trex1Q91XB0 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.98■□□□□ 0.95
Trex1Q91XB0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trex1Q91XB0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trex1Q91XB0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trex1Q91XB0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trex1Q91XB0 Gm9987-201ENSMUST00000069768 567 ntBASIC20.97■□□□□ 0.95
Trex1Q91XB0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trex1Q91XB0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trex1Q91XB0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trex1Q91XB0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trex1Q91XB0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trex1Q91XB0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trex1Q91XB0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trex1Q91XB0 Gm21814-202ENSMUST00000203277 873 ntBASIC20.95■□□□□ 0.94
Trex1Q91XB0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trex1Q91XB0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trex1Q91XB0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.95■□□□□ 0.94
Trex1Q91XB0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trex1Q91XB0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trex1Q91XB0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trex1Q91XB0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trex1Q91XB0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trex1Q91XB0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trex1Q91XB0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Gm11643-201ENSMUST00000119578 864 ntBASIC20.94■□□□□ 0.94
Trex1Q91XB0 Mir6349-201ENSMUST00000184059 97 ntBASIC20.94■□□□□ 0.94
Trex1Q91XB0 Gm43799-201ENSMUST00000201845 579 ntBASIC20.94■□□□□ 0.94
Trex1Q91XB0 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.94■□□□□ 0.94
Trex1Q91XB0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trex1Q91XB0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms