Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tram1Q91V04 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tram1Q91V04 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tram1Q91V04 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tram1Q91V04 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tram1Q91V04 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tram1Q91V04 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.72■□□□□ 0.11
Tram1Q91V04 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tram1Q91V04 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.72■□□□□ 0.11
Tram1Q91V04 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tram1Q91V04 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Tram1Q91V04 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Tram1Q91V04 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Tram1Q91V04 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.71■□□□□ 0.11
Tram1Q91V04 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.71■□□□□ 0.11
Tram1Q91V04 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.71■□□□□ 0.11
Tram1Q91V04 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.71■□□□□ 0.11
Tram1Q91V04 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tram1Q91V04 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tram1Q91V04 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tram1Q91V04 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tram1Q91V04 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tram1Q91V04 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Tram1Q91V04 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.71■□□□□ 0.1
Tram1Q91V04 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tram1Q91V04 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.7■□□□□ 0.1
Tram1Q91V04 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Tram1Q91V04 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.7■□□□□ 0.1
Tram1Q91V04 Gm22238-201ENSMUST00000175222 88 ntBASIC15.7■□□□□ 0.1
Tram1Q91V04 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.7■□□□□ 0.1
Tram1Q91V04 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Tram1Q91V04 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Tram1Q91V04 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tram1Q91V04 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Tram1Q91V04 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tram1Q91V04 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tram1Q91V04 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.68■□□□□ 0.1
Tram1Q91V04 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Tram1Q91V04 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tram1Q91V04 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tram1Q91V04 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tram1Q91V04 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tram1Q91V04 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.67■□□□□ 0.1
Tram1Q91V04 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tram1Q91V04 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Tram1Q91V04 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tram1Q91V04 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tram1Q91V04 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms