Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh18Q8VHR0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh18Q8VHR0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Gm8493-201ENSMUST00000196881 489 ntBASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh18Q8VHR0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh18Q8VHR0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Gm15039-201ENSMUST00000118914 875 ntBASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Gm11421-201ENSMUST00000122124 294 ntBASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Smad6-203ENSMUST00000179458 273 ntBASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh18Q8VHR0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh18Q8VHR0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pcdh18Q8VHR0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh18Q8VHR0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh18Q8VHR0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh18Q8VHR0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh18Q8VHR0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh18Q8VHR0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Pcdh18Q8VHR0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Gm27454-201ENSMUST00000185090 204 ntBASIC17.51■□□□□ 0.39
Pcdh18Q8VHR0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms