Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rab40cQ8VHQ4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Rab40cQ8VHQ4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rab40cQ8VHQ4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rab40cQ8VHQ4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rab40cQ8VHQ4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rab40cQ8VHQ4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.91□□□□□ -0.02
Rab40cQ8VHQ4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rab40cQ8VHQ4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Fst-202ENSMUST00000223640 2612 ntBASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rab40cQ8VHQ4 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Gm12922-201ENSMUST00000120626 809 ntBASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rab40cQ8VHQ4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Golgb1-201ENSMUST00000023534 498 ntBASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab40cQ8VHQ4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab40cQ8VHQ4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms