Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Zfp783-201ENSMUST00000095946 670 ntBASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx39aQ8VDW0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.27■□□□□ 0.83
Ddx39aQ8VDW0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx39aQ8VDW0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.27■□□□□ 0.83
Ddx39aQ8VDW0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx39aQ8VDW0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx39aQ8VDW0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx39aQ8VDW0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx39aQ8VDW0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx39aQ8VDW0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx39aQ8VDW0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx39aQ8VDW0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.26■□□□□ 0.83
Ddx39aQ8VDW0 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.26■□□□□ 0.83
Ddx39aQ8VDW0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Gm715-201ENSMUST00000117865 831 ntBASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx39aQ8VDW0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx39aQ8VDW0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx39aQ8VDW0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx39aQ8VDW0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.24■□□□□ 0.83
Ddx39aQ8VDW0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx39aQ8VDW0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Ddx39aQ8VDW0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx39aQ8VDW0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx39aQ8VDW0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ddx39aQ8VDW0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.24■□□□□ 0.83
Ddx39aQ8VDW0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx39aQ8VDW0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx39aQ8VDW0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx39aQ8VDW0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ddx39aQ8VDW0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx39aQ8VDW0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx39aQ8VDW0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms