Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uhrf1Q8VDF2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uhrf1Q8VDF2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uhrf1Q8VDF2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Uhrf1Q8VDF2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Uhrf1Q8VDF2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uhrf1Q8VDF2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uhrf1Q8VDF2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uhrf1Q8VDF2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uhrf1Q8VDF2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Uhrf1Q8VDF2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Uhrf1Q8VDF2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Uhrf1Q8VDF2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.9■□□□□ 0.62
Uhrf1Q8VDF2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Uhrf1Q8VDF2 Iqck-206ENSMUST00000208658 2891 ntBASIC18.9■□□□□ 0.62
Uhrf1Q8VDF2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Uhrf1Q8VDF2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Gm10819-201ENSMUST00000099988 561 ntBASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.89■□□□□ 0.61
Uhrf1Q8VDF2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Uhrf1Q8VDF2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Uhrf1Q8VDF2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Uhrf1Q8VDF2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Uhrf1Q8VDF2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Uhrf1Q8VDF2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms