Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ndc1Q8VCB1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ndc1Q8VCB1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndc1Q8VCB1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Gm10812-201ENSMUST00000099864 546 ntBASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndc1Q8VCB1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndc1Q8VCB1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Dio3-201ENSMUST00000097228 1449 ntBASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ndc1Q8VCB1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndc1Q8VCB1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.15■□□□□ 0.34
Ndc1Q8VCB1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ndc1Q8VCB1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ndc1Q8VCB1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms