Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf8Q8VC56 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.58■□□□□ 0.4
Rnf8Q8VC56 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.58■□□□□ 0.4
Rnf8Q8VC56 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Gm13234-201ENSMUST00000120010 747 ntBASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rnf8Q8VC56 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Gm38205-201ENSMUST00000192243 258 ntBASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf8Q8VC56 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Reep4-203ENSMUST00000226563 1444 ntBASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rnf8Q8VC56 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Gm10849-201ENSMUST00000100397 618 ntBASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Gm10033-202ENSMUST00000211874 928 ntBASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rnf8Q8VC56 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf8Q8VC56 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf8Q8VC56 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms