Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Gm10849-201ENSMUST00000100397 618 ntBASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Gm26571-201ENSMUST00000181399 666 ntBASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim29Q8R2Q0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.87■□□□□ 0.93
Trim29Q8R2Q0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Trim29Q8R2Q0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim29Q8R2Q0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim29Q8R2Q0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.86■□□□□ 0.93
Trim29Q8R2Q0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim29Q8R2Q0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim29Q8R2Q0 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim29Q8R2Q0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim29Q8R2Q0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim29Q8R2Q0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim29Q8R2Q0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim29Q8R2Q0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim29Q8R2Q0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim29Q8R2Q0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim29Q8R2Q0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim29Q8R2Q0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms