Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vmn1r28Q8R2C9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vmn1r28Q8R2C9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vmn1r28Q8R2C9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vmn1r28Q8R2C9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vmn1r28Q8R2C9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vmn1r28Q8R2C9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vmn1r28Q8R2C9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vmn1r28Q8R2C9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Vmn1r28Q8R2C9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.77■□□□□ 0.28
Vmn1r28Q8R2C9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vmn1r28Q8R2C9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vmn1r28Q8R2C9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vmn1r28Q8R2C9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vmn1r28Q8R2C9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vmn1r28Q8R2C9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vmn1r28Q8R2C9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vmn1r28Q8R2C9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vmn1r28Q8R2C9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vmn1r28Q8R2C9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vmn1r28Q8R2C9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vmn1r28Q8R2C9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vmn1r28Q8R2C9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Vmn1r28Q8R2C9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms