Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vmn1r228Q8R2A7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.84■□□□□ 0.13
Vmn1r228Q8R2A7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vmn1r228Q8R2A7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.83■□□□□ 0.13
Vmn1r228Q8R2A7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vmn1r228Q8R2A7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Vmn1r228Q8R2A7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vmn1r228Q8R2A7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r228Q8R2A7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r228Q8R2A7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r228Q8R2A7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms