Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zcchc9Q8R1J3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zcchc9Q8R1J3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zcchc9Q8R1J3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Zcchc9Q8R1J3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Zcchc9Q8R1J3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Zcchc9Q8R1J3 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.14■□□□□ 0.5
Zcchc9Q8R1J3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Zcchc9Q8R1J3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Zcchc9Q8R1J3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zcchc9Q8R1J3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Gm15378-201ENSMUST00000121894 207 ntBASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zcchc9Q8R1J3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Zcchc9Q8R1J3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms