Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp40Q8R1F9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp40Q8R1F9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp40Q8R1F9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp40Q8R1F9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.59■□□□□ 0.73
Rpp40Q8R1F9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpp40Q8R1F9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rpp40Q8R1F9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.59■□□□□ 0.73
Rpp40Q8R1F9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpp40Q8R1F9 Flg-201ENSMUST00000050758 1488 ntBASIC19.59■□□□□ 0.73
Rpp40Q8R1F9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpp40Q8R1F9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Rpp40Q8R1F9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpp40Q8R1F9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpp40Q8R1F9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpp40Q8R1F9 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.58■□□□□ 0.73
Rpp40Q8R1F9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.58■□□□□ 0.73
Rpp40Q8R1F9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpp40Q8R1F9 Gm11927-201ENSMUST00000118472 759 ntBASIC19.58■□□□□ 0.72
Rpp40Q8R1F9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpp40Q8R1F9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rpp40Q8R1F9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp40Q8R1F9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp40Q8R1F9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp40Q8R1F9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.56■□□□□ 0.72
Rpp40Q8R1F9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp40Q8R1F9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp40Q8R1F9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.56■□□□□ 0.72
Rpp40Q8R1F9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp40Q8R1F9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp40Q8R1F9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp40Q8R1F9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp40Q8R1F9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpp40Q8R1F9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpp40Q8R1F9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpp40Q8R1F9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpp40Q8R1F9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpp40Q8R1F9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.55■□□□□ 0.72
Rpp40Q8R1F9 Zfp783-201ENSMUST00000095946 670 ntBASIC19.55■□□□□ 0.72
Rpp40Q8R1F9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpp40Q8R1F9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpp40Q8R1F9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpp40Q8R1F9 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.54■□□□□ 0.72
Rpp40Q8R1F9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.54■□□□□ 0.72
Rpp40Q8R1F9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Gm13168-201ENSMUST00000121771 632 ntBASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp40Q8R1F9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rpp40Q8R1F9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rpp40Q8R1F9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rpp40Q8R1F9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms