Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx54Q8K4L0 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.01■■□□□ 1.43
Ddx54Q8K4L0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx54Q8K4L0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx54Q8K4L0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx54Q8K4L0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC24■■□□□ 1.43
Ddx54Q8K4L0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx54Q8K4L0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC24■■□□□ 1.43
Ddx54Q8K4L0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.99■■□□□ 1.43
Ddx54Q8K4L0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx54Q8K4L0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
Ddx54Q8K4L0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx54Q8K4L0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx54Q8K4L0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx54Q8K4L0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx54Q8K4L0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx54Q8K4L0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Ddx54Q8K4L0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Gm4217-201ENSMUST00000182243 1002 ntBASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.98■■□□□ 1.43
Ddx54Q8K4L0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Ddx54Q8K4L0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx54Q8K4L0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Ddx54Q8K4L0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Ddx54Q8K4L0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx54Q8K4L0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx54Q8K4L0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx54Q8K4L0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx54Q8K4L0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx54Q8K4L0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC23.95■■□□□ 1.42
Ddx54Q8K4L0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Ddx54Q8K4L0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx54Q8K4L0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx54Q8K4L0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Gm18669-201ENSMUST00000216049 778 ntBASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx54Q8K4L0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx54Q8K4L0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC23.93■■□□□ 1.42
Ddx54Q8K4L0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx54Q8K4L0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx54Q8K4L0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms