Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Trim68Q8K243 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim68Q8K243 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Trim68Q8K243 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim68Q8K243 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Trim68Q8K243 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim68Q8K243 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trim68Q8K243 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim68Q8K243 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim68Q8K243 Golph3-205ENSMUST00000228671 2842 ntBASIC19.75■□□□□ 0.75
Trim68Q8K243 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Trim68Q8K243 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim68Q8K243 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim68Q8K243 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim68Q8K243 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim68Q8K243 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim68Q8K243 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim68Q8K243 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim68Q8K243 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim68Q8K243 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim68Q8K243 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.74■□□□□ 0.75
Trim68Q8K243 Gm44549-201ENSMUST00000208351 577 ntBASIC19.74■□□□□ 0.75
Trim68Q8K243 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.74■□□□□ 0.75
Trim68Q8K243 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Trim68Q8K243 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim68Q8K243 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim68Q8K243 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim68Q8K243 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim68Q8K243 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim68Q8K243 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim68Q8K243 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim68Q8K243 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Trim68Q8K243 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim68Q8K243 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim68Q8K243 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim68Q8K243 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim68Q8K243 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim68Q8K243 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.73■□□□□ 0.75
Trim68Q8K243 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.73■□□□□ 0.75
Trim68Q8K243 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim68Q8K243 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim68Q8K243 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim68Q8K243 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim68Q8K243 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim68Q8K243 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim68Q8K243 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim68Q8K243 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim68Q8K243 Gm15378-201ENSMUST00000121894 207 ntBASIC19.72■□□□□ 0.75
Trim68Q8K243 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim68Q8K243 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim68Q8K243 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim68Q8K243 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trim68Q8K243 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim68Q8K243 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim68Q8K243 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.72■□□□□ 0.75
Trim68Q8K243 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim68Q8K243 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim68Q8K243 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim68Q8K243 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim68Q8K243 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim68Q8K243 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim68Q8K243 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim68Q8K243 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim68Q8K243 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim68Q8K243 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim68Q8K243 Mir1199-201ENSMUST00000117015 119 ntBASIC19.71■□□□□ 0.75
Trim68Q8K243 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim68Q8K243 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim68Q8K243 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.71■□□□□ 0.75
Trim68Q8K243 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim68Q8K243 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.71■□□□□ 0.75
Trim68Q8K243 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Trim68Q8K243 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim68Q8K243 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim68Q8K243 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim68Q8K243 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim68Q8K243 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim68Q8K243 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim68Q8K243 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim68Q8K243 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim68Q8K243 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim68Q8K243 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.7■□□□□ 0.74
Trim68Q8K243 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trim68Q8K243 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim68Q8K243 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim68Q8K243 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim68Q8K243 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim68Q8K243 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim68Q8K243 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim68Q8K243 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim68Q8K243 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim68Q8K243 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim68Q8K243 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.69■□□□□ 0.74
Trim68Q8K243 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim68Q8K243 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trim68Q8K243 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.69■□□□□ 0.74
Trim68Q8K243 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim68Q8K243 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Trim68Q8K243 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim68Q8K243 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms