Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim61Q8JZK6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim61Q8JZK6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim61Q8JZK6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Trim61Q8JZK6 Gm15565-201ENSMUST00000118890 427 ntBASIC19.14■□□□□ 0.65
Trim61Q8JZK6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim61Q8JZK6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim61Q8JZK6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trim61Q8JZK6 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.14■□□□□ 0.65
Trim61Q8JZK6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim61Q8JZK6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim61Q8JZK6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim61Q8JZK6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim61Q8JZK6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim61Q8JZK6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim61Q8JZK6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim61Q8JZK6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim61Q8JZK6 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Zfp783-201ENSMUST00000095946 670 ntBASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim61Q8JZK6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms