Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Gm45417-201ENSMUST00000209533 758 ntBASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox30Q8CGW4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Gm22325-201ENSMUST00000158904 308 ntBASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox30Q8CGW4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.03■□□□□ 0.8
Sox30Q8CGW4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox30Q8CGW4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox30Q8CGW4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.02■□□□□ 0.8
Sox30Q8CGW4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox30Q8CGW4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox30Q8CGW4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sox30Q8CGW4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sox30Q8CGW4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sox30Q8CGW4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
Sox30Q8CGW4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sox30Q8CGW4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Sox30Q8CGW4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sox30Q8CGW4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox30Q8CGW4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox30Q8CGW4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox30Q8CGW4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox30Q8CGW4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Sox30Q8CGW4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox30Q8CGW4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox30Q8CGW4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sox30Q8CGW4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox30Q8CGW4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20■□□□□ 0.79
Sox30Q8CGW4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox30Q8CGW4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20■□□□□ 0.79
Sox30Q8CGW4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox30Q8CGW4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox30Q8CGW4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox30Q8CGW4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox30Q8CGW4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sox30Q8CGW4 Reep4-203ENSMUST00000226563 1444 ntBASIC20■□□□□ 0.79
Sox30Q8CGW4 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.99■□□□□ 0.79
Sox30Q8CGW4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Sox30Q8CGW4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.99■□□□□ 0.79
Sox30Q8CGW4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sox30Q8CGW4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Sox30Q8CGW4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Sox30Q8CGW4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.99■□□□□ 0.79
Sox30Q8CGW4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sox30Q8CGW4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox30Q8CGW4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Sox30Q8CGW4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sox30Q8CGW4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox30Q8CGW4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox30Q8CGW4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sox30Q8CGW4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms