Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rp1l1Q8CGM2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rp1l1Q8CGM2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Gm17661-201ENSMUST00000170317 270 ntBASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Mir5130-201ENSMUST00000175160 84 ntBASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rp1l1Q8CGM2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rp1l1Q8CGM2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Gm22697-201ENSMUST00000175194 63 ntBASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Gm2274-201ENSMUST00000184539 609 ntBASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Rp1l1Q8CGM2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rp1l1Q8CGM2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Gm7370-201ENSMUST00000219471 767 ntBASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Gm7461-201ENSMUST00000058918 827 ntBASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rp1l1Q8CGM2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.08■□□□□ 0.65
Rp1l1Q8CGM2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rp1l1Q8CGM2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.65
Rp1l1Q8CGM2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rp1l1Q8CGM2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rp1l1Q8CGM2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rp1l1Q8CGM2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rp1l1Q8CGM2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms