Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rab43Q8CG50 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rab43Q8CG50 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rab43Q8CG50 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab43Q8CG50 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab43Q8CG50 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rab43Q8CG50 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab43Q8CG50 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rab43Q8CG50 Gm11643-201ENSMUST00000119578 864 ntBASIC17.79■□□□□ 0.44
Rab43Q8CG50 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.79■□□□□ 0.44
Rab43Q8CG50 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab43Q8CG50 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.79■□□□□ 0.44
Rab43Q8CG50 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Gm15375-201ENSMUST00000119510 849 ntBASIC17.78■□□□□ 0.44
Rab43Q8CG50 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.78■□□□□ 0.44
Rab43Q8CG50 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab43Q8CG50 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab43Q8CG50 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rab43Q8CG50 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab43Q8CG50 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab43Q8CG50 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.77■□□□□ 0.44
Rab43Q8CG50 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.77■□□□□ 0.44
Rab43Q8CG50 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rab43Q8CG50 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.77■□□□□ 0.44
Rab43Q8CG50 Gm38285-201ENSMUST00000192928 922 ntBASIC17.77■□□□□ 0.44
Rab43Q8CG50 Gm43183-201ENSMUST00000200632 547 ntBASIC17.77■□□□□ 0.44
Rab43Q8CG50 Gm5417-201ENSMUST00000079706 384 ntBASIC17.77■□□□□ 0.44
Rab43Q8CG50 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab43Q8CG50 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab43Q8CG50 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab43Q8CG50 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab43Q8CG50 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab43Q8CG50 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.76■□□□□ 0.43
Rab43Q8CG50 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.76■□□□□ 0.43
Rab43Q8CG50 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.76■□□□□ 0.43
Rab43Q8CG50 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab43Q8CG50 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Gm18025-201ENSMUST00000221733 862 ntBASIC17.75■□□□□ 0.43
Rab43Q8CG50 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rab43Q8CG50 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab43Q8CG50 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab43Q8CG50 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab43Q8CG50 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rab43Q8CG50 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.74■□□□□ 0.43
Rab43Q8CG50 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rab43Q8CG50 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab43Q8CG50 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rab43Q8CG50 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rab43Q8CG50 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab43Q8CG50 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab43Q8CG50 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms