Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc28aQ8CEI3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc28aQ8CEI3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc28aQ8CEI3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc28aQ8CEI3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc28aQ8CEI3 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.28■□□□□ 0.68
Ccdc28aQ8CEI3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Fst-202ENSMUST00000223640 2612 ntBASIC19.27■□□□□ 0.68
Ccdc28aQ8CEI3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Ccdc28aQ8CEI3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.27■□□□□ 0.67
Ccdc28aQ8CEI3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Ccdc28aQ8CEI3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc28aQ8CEI3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc28aQ8CEI3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Gm26833-201ENSMUST00000180899 440 ntBASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Gm40848-201ENSMUST00000221998 324 ntBASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc28aQ8CEI3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc28aQ8CEI3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Gm12821-201ENSMUST00000120022 600 ntBASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc28aQ8CEI3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc28aQ8CEI3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc28aQ8CEI3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc28aQ8CEI3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc28aQ8CEI3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms