Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb7Q8CDY9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb7Q8CDY9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb7Q8CDY9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb7Q8CDY9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb7Q8CDY9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb7Q8CDY9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb7Q8CDY9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb7Q8CDY9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Gm18284-201ENSMUST00000172604 624 ntBASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb7Q8CDY9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.29■□□□□ 0.52
Pcdhb7Q8CDY9 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb7Q8CDY9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms