Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col6a6Q8C6K9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a6Q8C6K9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Col6a6Q8C6K9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Col6a6Q8C6K9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Gm45058-201ENSMUST00000205810 766 ntBASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a6Q8C6K9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a6Q8C6K9 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.44■□□□□ 0.22
Col6a6Q8C6K9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a6Q8C6K9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Col6a6Q8C6K9 Mir6349-201ENSMUST00000184059 97 ntBASIC16.44■□□□□ 0.22
Col6a6Q8C6K9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a6Q8C6K9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a6Q8C6K9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Gm18959-201ENSMUST00000208954 655 ntBASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.43■□□□□ 0.22
Col6a6Q8C6K9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms