Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Smad6-203ENSMUST00000179458 273 ntBASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Gm8493-201ENSMUST00000196881 489 ntBASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf7Q8BTV2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Gm11421-201ENSMUST00000122124 294 ntBASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Gm43017-201ENSMUST00000198296 752 ntBASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf7Q8BTV2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf7Q8BTV2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf7Q8BTV2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf7Q8BTV2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.22■□□□□ 0.51
Cpsf7Q8BTV2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cpsf7Q8BTV2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf7Q8BTV2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf7Q8BTV2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf7Q8BTV2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf7Q8BTV2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf7Q8BTV2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf7Q8BTV2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cpsf7Q8BTV2 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf7Q8BTV2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cpsf7Q8BTV2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms