Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sfr1Q8BP27 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Sfr1Q8BP27 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.52■□□□□ 0.56
Sfr1Q8BP27 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.52■□□□□ 0.56
Sfr1Q8BP27 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sfr1Q8BP27 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sfr1Q8BP27 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.52■□□□□ 0.56
Sfr1Q8BP27 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sfr1Q8BP27 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sfr1Q8BP27 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sfr1Q8BP27 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.52■□□□□ 0.56
Sfr1Q8BP27 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sfr1Q8BP27 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sfr1Q8BP27 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.52■□□□□ 0.55
Sfr1Q8BP27 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Gm26524-201ENSMUST00000192339 390 ntBASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sfr1Q8BP27 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Rab3c-203ENSMUST00000224180 967 ntBASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Gm4968-201ENSMUST00000071458 858 ntBASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sfr1Q8BP27 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sfr1Q8BP27 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sfr1Q8BP27 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Gm12441-201ENSMUST00000121806 588 ntBASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.47■□□□□ 0.55
Sfr1Q8BP27 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms