Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tcaf1Q8BNE1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.74■□□□□ 0.75
Tcaf1Q8BNE1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tcaf1Q8BNE1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tcaf1Q8BNE1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tcaf1Q8BNE1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tcaf1Q8BNE1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tcaf1Q8BNE1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Tcaf1Q8BNE1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tcaf1Q8BNE1 Gm11927-201ENSMUST00000118472 759 ntBASIC19.73■□□□□ 0.75
Tcaf1Q8BNE1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tcaf1Q8BNE1 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.73■□□□□ 0.75
Tcaf1Q8BNE1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tcaf1Q8BNE1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tcaf1Q8BNE1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tcaf1Q8BNE1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tcaf1Q8BNE1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.72■□□□□ 0.75
Tcaf1Q8BNE1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcaf1Q8BNE1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcaf1Q8BNE1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.71■□□□□ 0.75
Tcaf1Q8BNE1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcaf1Q8BNE1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.71■□□□□ 0.75
Tcaf1Q8BNE1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.71■□□□□ 0.75
Tcaf1Q8BNE1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.71■□□□□ 0.75
Tcaf1Q8BNE1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcaf1Q8BNE1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tcaf1Q8BNE1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.71■□□□□ 0.75
Tcaf1Q8BNE1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Zfp783-201ENSMUST00000095946 670 ntBASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf1Q8BNE1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf1Q8BNE1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf1Q8BNE1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf1Q8BNE1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf1Q8BNE1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf1Q8BNE1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf1Q8BNE1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf1Q8BNE1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf1Q8BNE1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf1Q8BNE1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Tcaf1Q8BNE1 Gm13168-201ENSMUST00000121771 632 ntBASIC19.68■□□□□ 0.74
Tcaf1Q8BNE1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Tcaf1Q8BNE1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf1Q8BNE1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Tcaf1Q8BNE1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf1Q8BNE1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf1Q8BNE1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Gm38285-201ENSMUST00000192928 922 ntBASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf1Q8BNE1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Gm8520-201ENSMUST00000186517 868 ntBASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Mtag2-201ENSMUST00000058665 714 ntBASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf1Q8BNE1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms