Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ckap4Q8BMK4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap4Q8BMK4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap4Q8BMK4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ckap4Q8BMK4 Gm7860-201ENSMUST00000121190 879 ntBASIC17.27■□□□□ 0.36
Ckap4Q8BMK4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ckap4Q8BMK4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.27■□□□□ 0.36
Ckap4Q8BMK4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap4Q8BMK4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ckap4Q8BMK4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ckap4Q8BMK4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap4Q8BMK4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Ckap4Q8BMK4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ckap4Q8BMK4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap4Q8BMK4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap4Q8BMK4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ckap4Q8BMK4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap4Q8BMK4 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.24■□□□□ 0.35
Ckap4Q8BMK4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap4Q8BMK4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap4Q8BMK4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap4Q8BMK4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap4Q8BMK4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap4Q8BMK4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap4Q8BMK4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ckap4Q8BMK4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Gm9988-201ENSMUST00000069786 435 ntBASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ckap4Q8BMK4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms