Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Gm37179-201ENSMUST00000194862 823 ntBASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh20Q8BIZ0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Gm13146-201ENSMUST00000118508 780 ntBASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Gm38205-201ENSMUST00000192243 258 ntBASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdh20Q8BIZ0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Gm7514-201ENSMUST00000209475 934 ntBASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh20Q8BIZ0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh20Q8BIZ0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh20Q8BIZ0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh20Q8BIZ0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh20Q8BIZ0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh20Q8BIZ0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh20Q8BIZ0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh20Q8BIZ0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdh20Q8BIZ0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms