Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn3Q8BHH8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn3Q8BHH8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clrn3Q8BHH8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clrn3Q8BHH8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clrn3Q8BHH8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Clrn3Q8BHH8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clrn3Q8BHH8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clrn3Q8BHH8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clrn3Q8BHH8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 Gm26571-201ENSMUST00000181399 666 ntBASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn3Q8BHH8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Gm6420-201ENSMUST00000193885 723 ntBASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn3Q8BHH8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Gm27405-201ENSMUST00000184201 112 ntBASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn3Q8BHH8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Clrn3Q8BHH8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms