Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Gm12441-201ENSMUST00000121806 588 ntBASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Depdc1bQ8BH88 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Gm7290-201ENSMUST00000104990 617 ntBASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Gm12918-201ENSMUST00000120234 636 ntBASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Gm15710-201ENSMUST00000121821 636 ntBASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Gm5075-201ENSMUST00000196916 622 ntBASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Depdc1bQ8BH88 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Depdc1bQ8BH88 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Depdc1bQ8BH88 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Depdc1bQ8BH88 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Depdc1bQ8BH88 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.83■□□□□ 0.76
Depdc1bQ8BH88 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Depdc1bQ8BH88 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Depdc1bQ8BH88 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.83■□□□□ 0.76
Depdc1bQ8BH88 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Depdc1bQ8BH88 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Depdc1bQ8BH88 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Depdc1bQ8BH88 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1bQ8BH88 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1bQ8BH88 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.81■□□□□ 0.76
Depdc1bQ8BH88 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1bQ8BH88 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.81■□□□□ 0.76
Depdc1bQ8BH88 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.81■□□□□ 0.76
Depdc1bQ8BH88 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Depdc1bQ8BH88 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Gm6420-201ENSMUST00000193885 723 ntBASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Depdc1bQ8BH88 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1bQ8BH88 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1bQ8BH88 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1bQ8BH88 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1bQ8BH88 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.79■□□□□ 0.76
Depdc1bQ8BH88 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1bQ8BH88 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1bQ8BH88 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1bQ8BH88 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1bQ8BH88 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Depdc1bQ8BH88 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1bQ8BH88 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1bQ8BH88 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1bQ8BH88 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1bQ8BH88 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.78■□□□□ 0.76
Depdc1bQ8BH88 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Depdc1bQ8BH88 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Depdc1bQ8BH88 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms