Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Gm12896-201ENSMUST00000118430 226 ntBASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Gm10653-202ENSMUST00000139570 835 ntBASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.61■□□□□ 0.41
Trim23Q8BGX0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim23Q8BGX0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim23Q8BGX0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim23Q8BGX0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim23Q8BGX0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim23Q8BGX0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim23Q8BGX0 Gm20760-201ENSMUST00000179197 648 ntBASIC17.59■□□□□ 0.41
Trim23Q8BGX0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim23Q8BGX0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim23Q8BGX0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim23Q8BGX0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim23Q8BGX0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim23Q8BGX0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim23Q8BGX0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim23Q8BGX0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim23Q8BGX0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.58■□□□□ 0.41
Trim23Q8BGX0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim23Q8BGX0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim23Q8BGX0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.57■□□□□ 0.4
Trim23Q8BGX0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim23Q8BGX0 Flg-201ENSMUST00000050758 1488 ntBASIC17.56■□□□□ 0.4
Trim23Q8BGX0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim23Q8BGX0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim23Q8BGX0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim23Q8BGX0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim23Q8BGX0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim23Q8BGX0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim23Q8BGX0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim23Q8BGX0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim23Q8BGX0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim23Q8BGX0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Gm11249-201ENSMUST00000117071 859 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms