Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim50Q810I2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim50Q810I2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.81■□□□□ 0.44
Trim50Q810I2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim50Q810I2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim50Q810I2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trim50Q810I2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim50Q810I2 Gm37179-201ENSMUST00000194862 823 ntBASIC17.81■□□□□ 0.44
Trim50Q810I2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim50Q810I2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Trim50Q810I2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim50Q810I2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim50Q810I2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim50Q810I2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim50Q810I2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim50Q810I2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim50Q810I2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim50Q810I2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim50Q810I2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim50Q810I2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim50Q810I2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim50Q810I2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim50Q810I2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.79■□□□□ 0.44
Trim50Q810I2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim50Q810I2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim50Q810I2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.79■□□□□ 0.44
Trim50Q810I2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim50Q810I2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim50Q810I2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim50Q810I2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.78■□□□□ 0.44
Trim50Q810I2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim50Q810I2 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.78■□□□□ 0.44
Trim50Q810I2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Trim50Q810I2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Trim50Q810I2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim50Q810I2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim50Q810I2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Trim50Q810I2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim50Q810I2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim50Q810I2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim50Q810I2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim50Q810I2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim50Q810I2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim50Q810I2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim50Q810I2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim50Q810I2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim50Q810I2 Gm7290-201ENSMUST00000104990 617 ntBASIC17.77■□□□□ 0.44
Trim50Q810I2 Gm12918-201ENSMUST00000120234 636 ntBASIC17.77■□□□□ 0.44
Trim50Q810I2 Gm15710-201ENSMUST00000121821 636 ntBASIC17.77■□□□□ 0.44
Trim50Q810I2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim50Q810I2 Gm5075-201ENSMUST00000196916 622 ntBASIC17.77■□□□□ 0.44
Trim50Q810I2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim50Q810I2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim50Q810I2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.77■□□□□ 0.44
Trim50Q810I2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.77■□□□□ 0.44
Trim50Q810I2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim50Q810I2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim50Q810I2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trim50Q810I2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim50Q810I2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim50Q810I2 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.76■□□□□ 0.43
Trim50Q810I2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Trim50Q810I2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim50Q810I2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim50Q810I2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim50Q810I2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim50Q810I2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim50Q810I2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim50Q810I2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim50Q810I2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim50Q810I2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim50Q810I2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim50Q810I2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim50Q810I2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim50Q810I2 Gm6211-202ENSMUST00000167849 925 ntBASIC17.75■□□□□ 0.43
Trim50Q810I2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.75■□□□□ 0.43
Trim50Q810I2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms