Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.72■□□□□ 0.91
Trnp1Q80ZI1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
Trnp1Q80ZI1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trnp1Q80ZI1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trnp1Q80ZI1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trnp1Q80ZI1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.72■□□□□ 0.91
Trnp1Q80ZI1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Mir2861-201ENSMUST00000175539 82 ntBASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Gm38027-201ENSMUST00000192315 235 ntBASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trnp1Q80ZI1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trnp1Q80ZI1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trnp1Q80ZI1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trnp1Q80ZI1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trnp1Q80ZI1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.69■□□□□ 0.9
Trnp1Q80ZI1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trnp1Q80ZI1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trnp1Q80ZI1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trnp1Q80ZI1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trnp1Q80ZI1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trnp1Q80ZI1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trnp1Q80ZI1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trnp1Q80ZI1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trnp1Q80ZI1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.68■□□□□ 0.9
Trnp1Q80ZI1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trnp1Q80ZI1 Gm22697-201ENSMUST00000175194 63 ntBASIC20.68■□□□□ 0.9
Trnp1Q80ZI1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.68■□□□□ 0.9
Trnp1Q80ZI1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trnp1Q80ZI1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trnp1Q80ZI1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trnp1Q80ZI1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trnp1Q80ZI1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trnp1Q80ZI1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trnp1Q80ZI1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trnp1Q80ZI1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trnp1Q80ZI1 Gm25016-201ENSMUST00000158399 131 ntBASIC20.66■□□□□ 0.9
Trnp1Q80ZI1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Trnp1Q80ZI1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.66■□□□□ 0.9
Trnp1Q80ZI1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trnp1Q80ZI1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trnp1Q80ZI1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.66■□□□□ 0.9
Trnp1Q80ZI1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trnp1Q80ZI1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trnp1Q80ZI1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trnp1Q80ZI1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trnp1Q80ZI1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trnp1Q80ZI1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trnp1Q80ZI1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trnp1Q80ZI1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.65■□□□□ 0.9
Trnp1Q80ZI1 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.65■□□□□ 0.9
Trnp1Q80ZI1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trnp1Q80ZI1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trnp1Q80ZI1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trnp1Q80ZI1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trnp1Q80ZI1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.64■□□□□ 0.9
Trnp1Q80ZI1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trnp1Q80ZI1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trnp1Q80ZI1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms