Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Flg-201ENSMUST00000050758 1488 ntBASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Lrrtm4Q80XG9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrtm4Q80XG9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.77■□□□□ 0.44
Lrrtm4Q80XG9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrtm4Q80XG9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrtm4Q80XG9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrtm4Q80XG9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrtm4Q80XG9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrtm4Q80XG9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrtm4Q80XG9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrtm4Q80XG9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrtm4Q80XG9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrtm4Q80XG9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrtm4Q80XG9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lrrtm4Q80XG9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrtm4Q80XG9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrtm4Q80XG9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Lrrtm4Q80XG9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrtm4Q80XG9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrtm4Q80XG9 Golph3-205ENSMUST00000228671 2842 ntBASIC17.75■□□□□ 0.43
Lrrtm4Q80XG9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Gm11249-201ENSMUST00000117071 859 ntBASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Gm8520-201ENSMUST00000186517 868 ntBASIC17.74■□□□□ 0.43
Lrrtm4Q80XG9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms