Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Kdm1aQ6ZQ88 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1aQ6ZQ88 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Kdm1aQ6ZQ88 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Kdm1aQ6ZQ88 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.2■□□□□ 0.82
Kdm1aQ6ZQ88 Gm10033-202ENSMUST00000211874 928 ntBASIC20.2■□□□□ 0.82
Kdm1aQ6ZQ88 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.2■□□□□ 0.82
Kdm1aQ6ZQ88 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.2■□□□□ 0.82
Kdm1aQ6ZQ88 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.2■□□□□ 0.82
Kdm1aQ6ZQ88 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1aQ6ZQ88 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Gm42642-201ENSMUST00000200683 355 ntBASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Gm7514-201ENSMUST00000209475 934 ntBASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1aQ6ZQ88 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Nespas-201ENSMUST00000143738 1083 ntBASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Gm18671-201ENSMUST00000214826 683 ntBASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.18■□□□□ 0.82
Kdm1aQ6ZQ88 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Rarb-207ENSMUST00000225921 2756 ntBASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Gm5874-201ENSMUST00000096101 508 ntBASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1aQ6ZQ88 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Kdm1aQ6ZQ88 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Fst-202ENSMUST00000223640 2612 ntBASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1aQ6ZQ88 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm1aQ6ZQ88 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Kdm1aQ6ZQ88 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Kdm1aQ6ZQ88 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm1aQ6ZQ88 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms