Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf220Q6PDX6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf220Q6PDX6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf220Q6PDX6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rnf220Q6PDX6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf220Q6PDX6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf220Q6PDX6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 Gm45102-201ENSMUST00000207427 857 ntBASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf220Q6PDX6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf220Q6PDX6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf220Q6PDX6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms