Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim37Q6PCX9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim37Q6PCX9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.22■□□□□ 0.83
Trim37Q6PCX9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim37Q6PCX9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim37Q6PCX9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim37Q6PCX9 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.22■□□□□ 0.83
Trim37Q6PCX9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim37Q6PCX9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim37Q6PCX9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim37Q6PCX9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trim37Q6PCX9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim37Q6PCX9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim37Q6PCX9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim37Q6PCX9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim37Q6PCX9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim37Q6PCX9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim37Q6PCX9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim37Q6PCX9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim37Q6PCX9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim37Q6PCX9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim37Q6PCX9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Golph3-205ENSMUST00000228671 2842 ntBASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim37Q6PCX9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim37Q6PCX9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim37Q6PCX9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim37Q6PCX9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim37Q6PCX9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trim37Q6PCX9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim37Q6PCX9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim37Q6PCX9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim37Q6PCX9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim37Q6PCX9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms