Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.08■□□□□ 0.97
Usp50Q6P8X6 Flg-201ENSMUST00000050758 1488 ntBASIC21.08■□□□□ 0.97
Usp50Q6P8X6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp50Q6P8X6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp50Q6P8X6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.08■□□□□ 0.97
Usp50Q6P8X6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp50Q6P8X6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.08■□□□□ 0.97
Usp50Q6P8X6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.08■□□□□ 0.97
Usp50Q6P8X6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Usp50Q6P8X6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp50Q6P8X6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp50Q6P8X6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp50Q6P8X6 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.06■□□□□ 0.96
Usp50Q6P8X6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp50Q6P8X6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
Usp50Q6P8X6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp50Q6P8X6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.06■□□□□ 0.96
Usp50Q6P8X6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.06■□□□□ 0.96
Usp50Q6P8X6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Usp50Q6P8X6 Zfp783-201ENSMUST00000095946 670 ntBASIC21.06■□□□□ 0.96
Usp50Q6P8X6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp50Q6P8X6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp50Q6P8X6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Gm10698-201ENSMUST00000182663 604 ntBASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Usp50Q6P8X6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.03■□□□□ 0.96
Usp50Q6P8X6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp50Q6P8X6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp50Q6P8X6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp50Q6P8X6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp50Q6P8X6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp50Q6P8X6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp50Q6P8X6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp50Q6P8X6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp50Q6P8X6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Usp50Q6P8X6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp50Q6P8X6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp50Q6P8X6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp50Q6P8X6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms