Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Clcn1Q64347 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Clcn1Q64347 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Clcn1Q64347 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.3
Clcn1Q64347 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
Clcn1Q64347 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Clcn1Q64347 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Clcn1Q64347 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Clcn1Q64347 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Clcn1Q64347 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Clcn1Q64347 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Clcn1Q64347 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Clcn1Q64347 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Clcn1Q64347 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Clcn1Q64347 Gm42545-201ENSMUST00000202755 922 ntBASIC23.13■■□□□ 1.29
Clcn1Q64347 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Clcn1Q64347 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Clcn1Q64347 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
Clcn1Q64347 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Clcn1Q64347 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Clcn1Q64347 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Clcn1Q64347 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Clcn1Q64347 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn1Q64347 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn1Q64347 Gm6433-201ENSMUST00000118634 875 ntBASIC23.12■■□□□ 1.29
Clcn1Q64347 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn1Q64347 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn1Q64347 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn1Q64347 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn1Q64347 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn1Q64347 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.12■■□□□ 1.29
Clcn1Q64347 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn1Q64347 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn1Q64347 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn1Q64347 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Clcn1Q64347 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Clcn1Q64347 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Clcn1Q64347 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC23.11■■□□□ 1.29
Clcn1Q64347 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Clcn1Q64347 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Clcn1Q64347 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Clcn1Q64347 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC23.1■■□□□ 1.29
Clcn1Q64347 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Clcn1Q64347 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Clcn1Q64347 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC23.1■■□□□ 1.29
Clcn1Q64347 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.1■■□□□ 1.29
Clcn1Q64347 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Clcn1Q64347 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Clcn1Q64347 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
Clcn1Q64347 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Clcn1Q64347 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.1■■□□□ 1.29
Clcn1Q64347 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Clcn1Q64347 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Clcn1Q64347 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Clcn1Q64347 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Clcn1Q64347 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
Clcn1Q64347 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Clcn1Q64347 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC23.09■■□□□ 1.29
Clcn1Q64347 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Clcn1Q64347 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.09■■□□□ 1.29
Clcn1Q64347 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Clcn1Q64347 Gm45560-201ENSMUST00000211492 1472 ntBASIC23.09■■□□□ 1.29
Clcn1Q64347 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Clcn1Q64347 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC23.09■■□□□ 1.29
Clcn1Q64347 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Clcn1Q64347 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn1Q64347 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn1Q64347 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn1Q64347 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn1Q64347 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn1Q64347 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn1Q64347 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn1Q64347 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn1Q64347 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn1Q64347 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn1Q64347 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Clcn1Q64347 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Clcn1Q64347 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Clcn1Q64347 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Clcn1Q64347 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Clcn1Q64347 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC23.07■■□□□ 1.28
Clcn1Q64347 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Clcn1Q64347 Gm18025-201ENSMUST00000221733 862 ntBASIC23.07■■□□□ 1.28
Clcn1Q64347 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Clcn1Q64347 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Clcn1Q64347 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Clcn1Q64347 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Clcn1Q64347 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Clcn1Q64347 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Clcn1Q64347 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Clcn1Q64347 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC23.06■■□□□ 1.28
Clcn1Q64347 Arhgef4-208ENSMUST00000211073 171 ntBASIC23.06■■□□□ 1.28
Clcn1Q64347 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Clcn1Q64347 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Clcn1Q64347 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Clcn1Q64347 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Clcn1Q64347 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Clcn1Q64347 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Clcn1Q64347 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Clcn1Q64347 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms